BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB003A09LP1|AL425059
(289 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig168 321 6e-88
>3x_Contig168
Length = 941
Score = 321 bits (158), Expect = 6e-88
Identities = 159/160 (99%)
Strand = Plus / Minus
Query: 1 gatctttaaataaaacttatatttgagattatttaaatgaattaagtaataaaggtgtaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160 gatctttaaataaaacttatatttgagattatttaaatgaattaagtaataaaggtgtaa 101
Query: 61 aattacaacatttaaataatattaattcktgatcatctcaaatttataaatttaataaaa 120
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 100 aattacaacatttaaataatattaattcttgatcatctcaaatttataaatttaataaaa 41
Query: 121 ctgaagaaattaataatactatttatgatagattagtaac 160
||||||||||||||||||||||||||||||||||||||||
Sbjct: 40 ctgaagaaattaataatactatttatgatagattagtaac 1
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.41 0.716 1.33
Gapped
Lambda K H
1.41 0.716 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3252
Number of Sequences: 1807
Number of extensions: 3252
Number of successful extensions: 112
Number of sequences better than 1.0e-20: 1
length of query: 289
length of database: 10,358,551
effective HSP length: 15
effective length of query: 274
effective length of database: 10,331,446
effective search space: 2830816204
effective search space used: 2830816204
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.4 bits)
S1: 12 (24.8 bits)
S2: 48 (97.9 bits)